dbCAN HGM

Cluster: ShaoY_2019_ERR3404781_bin.7_CGC15

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	ShaoY_2019_ERR3404781_bin.7_k141_6012	ShaoY_2019_ERR3404781_bin.7_k141_6012_445	462139	463215	+	GT28
CAZyme	ShaoY_2019_ERR3404781_bin.7_k141_6012	ShaoY_2019_ERR3404781_bin.7_k141_6012_446	463206	463895	+	CE4
TC	ShaoY_2019_ERR3404781_bin.7_k141_6012	ShaoY_2019_ERR3404781_bin.7_k141_6012_447	463888	464964	+	4.D.2.1.5
TF	ShaoY_2019_ERR3404781_bin.7_k141_6012	ShaoY_2019_ERR3404781_bin.7_k141_6012_448	464954	465655	+	Trans_reg_C
STP	ShaoY_2019_ERR3404781_bin.7_k141_6012	ShaoY_2019_ERR3404781_bin.7_k141_6012_449	465642	467234	+	HATPase_c \| HisKA
TC	ShaoY_2019_ERR3404781_bin.7_k141_6012	ShaoY_2019_ERR3404781_bin.7_k141_6012_450	467356	469476	-	9.A.8.1.5

Gene ID: ShaoY_2019_ERR3404781_bin.7_k141_6012_445
Type: CAZyme
Location: 462139 - 463215 (+)

Gene ID: ShaoY_2019_ERR3404781_bin.7_k141_6012_446
Type: CAZyme
Location: 463206 - 463895 (+)

Gene ID: ShaoY_2019_ERR3404781_bin.7_k141_6012_447
Type: TC
Location: 463888 - 464964 (+)

Gene ID: ShaoY_2019_ERR3404781_bin.7_k141_6012_448
Type: TF
Location: 464954 - 465655 (+)

Gene ID: ShaoY_2019_ERR3404781_bin.7_k141_6012_449
Type: STP
Location: 465642 - 467234 (+)

Gene ID: ShaoY_2019_ERR3404781_bin.7_k141_6012_450
Type: TC
Location: 467356 - 469476 (-)

Taxonomic Lineage

Domain

→

Phylum

→

Class

→

Order

→

Family

→

Genus

→

Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.