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Cluster: ShaoY_2019_ERR3404781_bin.7_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme ShaoY_2019_ERR3404781_bin.7_k141_6012 ShaoY_2019_ERR3404781_bin.7_k141_6012_322 334231 334905 + GT2
pfam ShaoY_2019_ERR3404781_bin.7_k141_6012 ShaoY_2019_ERR3404781_bin.7_k141_6012_323 334871 335602 + CofC | DUF2064
pfam ShaoY_2019_ERR3404781_bin.7_k141_6012 ShaoY_2019_ERR3404781_bin.7_k141_6012_324 335581 336603 + APH
TC ShaoY_2019_ERR3404781_bin.7_k141_6012 ShaoY_2019_ERR3404781_bin.7_k141_6012_325 336864 337577 + 9.B.27.1.2
NULL(UNKNOWN) ShaoY_2019_ERR3404781_bin.7_k141_6012 ShaoY_2019_ERR3404781_bin.7_k141_6012_326 337625 338272 + NULL(UNKNOWN)
[View Structural Homologs]
pfam ShaoY_2019_ERR3404781_bin.7_k141_6012 ShaoY_2019_ERR3404781_bin.7_k141_6012_327 338379 338786 + DUF4418
TC ShaoY_2019_ERR3404781_bin.7_k141_6012 ShaoY_2019_ERR3404781_bin.7_k141_6012_328 338789 340003 + 3.A.1.136.1
TC ShaoY_2019_ERR3404781_bin.7_k141_6012 ShaoY_2019_ERR3404781_bin.7_k141_6012_329 340003 340668 + 3.A.1.125.1
NULL(UNKNOWN) ShaoY_2019_ERR3404781_bin.7_k141_6012 ShaoY_2019_ERR3404781_bin.7_k141_6012_330 340684 341079 + NULL(UNKNOWN)
[View Structural Homologs]
TC ShaoY_2019_ERR3404781_bin.7_k141_6012 ShaoY_2019_ERR3404781_bin.7_k141_6012_331 341133 341822 + 9.B.27.1.1
pfam ShaoY_2019_ERR3404781_bin.7_k141_6012 ShaoY_2019_ERR3404781_bin.7_k141_6012_332 341824 342801 + CCG | CCG | Fer4_8 | Fer4_17
TC ShaoY_2019_ERR3404781_bin.7_k141_6012 ShaoY_2019_ERR3404781_bin.7_k141_6012_333 342841 344064 + 3.A.1.19.4
TC ShaoY_2019_ERR3404781_bin.7_k141_6012 ShaoY_2019_ERR3404781_bin.7_k141_6012_334 344064 344930 + 3.A.1.1.7
pfam ShaoY_2019_ERR3404781_bin.7_k141_6012 ShaoY_2019_ERR3404781_bin.7_k141_6012_335 344939 345748 + BPD_transp_1
TC ShaoY_2019_ERR3404781_bin.7_k141_6012 ShaoY_2019_ERR3404781_bin.7_k141_6012_336 345765 346784 + 3.A.1.20.1
Gene ID: ShaoY_2019_ERR3404781_bin.7_k141_6012_322
Type: CAZyme
Location: 334231 - 334905 (+)
Gene ID: ShaoY_2019_ERR3404781_bin.7_k141_6012_323
Type: pfam
Location: 334871 - 335602 (+)
Gene ID: ShaoY_2019_ERR3404781_bin.7_k141_6012_324
Type: pfam
Location: 335581 - 336603 (+)
Gene ID: ShaoY_2019_ERR3404781_bin.7_k141_6012_325
Type: TC
Location: 336864 - 337577 (+)
Gene ID: ShaoY_2019_ERR3404781_bin.7_k141_6012_326
Type:
Location: 337625 - 338272 (+)
Gene ID: ShaoY_2019_ERR3404781_bin.7_k141_6012_327
Type: pfam
Location: 338379 - 338786 (+)
Gene ID: ShaoY_2019_ERR3404781_bin.7_k141_6012_328
Type: TC
Location: 338789 - 340003 (+)
Gene ID: ShaoY_2019_ERR3404781_bin.7_k141_6012_329
Type: TC
Location: 340003 - 340668 (+)
Gene ID: ShaoY_2019_ERR3404781_bin.7_k141_6012_330
Type:
Location: 340684 - 341079 (+)
Gene ID: ShaoY_2019_ERR3404781_bin.7_k141_6012_331
Type: TC
Location: 341133 - 341822 (+)
Gene ID: ShaoY_2019_ERR3404781_bin.7_k141_6012_332
Type: pfam
Location: 341824 - 342801 (+)
Gene ID: ShaoY_2019_ERR3404781_bin.7_k141_6012_333
Type: TC
Location: 342841 - 344064 (+)
Gene ID: ShaoY_2019_ERR3404781_bin.7_k141_6012_334
Type: TC
Location: 344064 - 344930 (+)
Gene ID: ShaoY_2019_ERR3404781_bin.7_k141_6012_335
Type: pfam
Location: 344939 - 345748 (+)
Gene ID: ShaoY_2019_ERR3404781_bin.7_k141_6012_336
Type: TC
Location: 345765 - 346784 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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