dbCAN Logo

Cluster: ShaoY_2019_ERR3404711_bin.5_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC ShaoY_2019_ERR3404711_bin.5_k141_1631 ShaoY_2019_ERR3404711_bin.5_k141_1631_191 215175 217412 + 1.I.1.1.3
STP ShaoY_2019_ERR3404711_bin.5_k141_1631 ShaoY_2019_ERR3404711_bin.5_k141_1631_192 218036 218797 + Fer4
TC ShaoY_2019_ERR3404711_bin.5_k141_1631 ShaoY_2019_ERR3404711_bin.5_k141_1631_193 219141 219653 + 4.A.1.2.5
pfam ShaoY_2019_ERR3404711_bin.5_k141_1631 ShaoY_2019_ERR3404711_bin.5_k141_1631_194 219672 220526 + PRD | PRD | CAT_RBD
TC ShaoY_2019_ERR3404711_bin.5_k141_1631 ShaoY_2019_ERR3404711_bin.5_k141_1631_195 220626 222242 + 4.A.1.1.3
CAZyme ShaoY_2019_ERR3404711_bin.5_k141_1631 ShaoY_2019_ERR3404711_bin.5_k141_1631_196 222246 223628 + GH4
Gene ID: ShaoY_2019_ERR3404711_bin.5_k141_1631_191
Type: TC
Location: 215175 - 217412 (+)
Gene ID: ShaoY_2019_ERR3404711_bin.5_k141_1631_192
Type: STP
Location: 218036 - 218797 (+)
Gene ID: ShaoY_2019_ERR3404711_bin.5_k141_1631_193
Type: TC
Location: 219141 - 219653 (+)
Gene ID: ShaoY_2019_ERR3404711_bin.5_k141_1631_194
Type: pfam
Location: 219672 - 220526 (+)
Gene ID: ShaoY_2019_ERR3404711_bin.5_k141_1631_195
Type: TC
Location: 220626 - 222242 (+)
Gene ID: ShaoY_2019_ERR3404711_bin.5_k141_1631_196
Type: CAZyme
Location: 222246 - 223628 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List