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Cluster: SW221_maxbin.011_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_79073 k141_79073_19 23338 24507 - CE9
STP k141_79073 k141_79073_20 24625 25791 - SIS | SIS
TF k141_79073 k141_79073_21 25906 26637 - GntR
TC k141_79073 k141_79073_22 26821 27903 - 4.A.6.1.4
TC k141_79073 k141_79073_23 27893 28693 - 4.A.6.1.4
TC k141_79073 k141_79073_24 28784 29266 - 4.A.6.1.4
pfam k141_79073 k141_79073_25 29303 29584 - YajC
TC k141_79073 k141_79073_26 29584 30027 - 4.A.6.1.16
Gene ID: k141_79073_19
Type: CAZyme
Location: 23338 - 24507 (-)
Gene ID: k141_79073_20
Type: STP
Location: 24625 - 25791 (-)
Gene ID: k141_79073_21
Type: TF
Location: 25906 - 26637 (-)
Gene ID: k141_79073_22
Type: TC
Location: 26821 - 27903 (-)
Gene ID: k141_79073_23
Type: TC
Location: 27893 - 28693 (-)
Gene ID: k141_79073_24
Type: TC
Location: 28784 - 29266 (-)
Gene ID: k141_79073_25
Type: pfam
Location: 29303 - 29584 (-)
Gene ID: k141_79073_26
Type: TC
Location: 29584 - 30027 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_79073_25 vegan > omnivore 1.03203 0.01057

🧭 Explore Read Mapping of CGC

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