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Cluster: SW221_maxbin.011_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_79073 k141_79073_2 1484 1822 - 4.A.3.1.2
TF k141_79073 k141_79073_3 2037 3041 - LacI
TC k141_79073 k141_79073_4 3399 5174 + 4.A.3.1.1
CAZyme k141_79073 k141_79073_5 5241 6680 + GH1
TF k141_79073 k141_79073_6 6948 7985 - LacI
CAZyme k141_79073 k141_79073_7 8327 9769 + GH1
TC k141_79073 k141_79073_8 9945 11705 + 4.A.3.1.1
TF k141_79073 k141_79073_9 11963 12973 - LacI
TC k141_79073 k141_79073_10 13249 15006 + 4.A.3.1.1
CAZyme k141_79073 k141_79073_11 15083 16504 + GH1
TF k141_79073 k141_79073_12 16699 17463 - HTH_DeoR
sulfatase k141_79073 k141_79073_13 17670 18722 + S1_4
TC k141_79073 k141_79073_14 19048 19530 - 4.A.6.1.3
Gene ID: k141_79073_2
Type: TC
Location: 1484 - 1822 (-)
Gene ID: k141_79073_3
Type: TF
Location: 2037 - 3041 (-)
Gene ID: k141_79073_4
Type: TC
Location: 3399 - 5174 (+)
Gene ID: k141_79073_5
Type: CAZyme
Location: 5241 - 6680 (+)
Gene ID: k141_79073_6
Type: TF
Location: 6948 - 7985 (-)
Gene ID: k141_79073_7
Type: CAZyme
Location: 8327 - 9769 (+)
Gene ID: k141_79073_8
Type: TC
Location: 9945 - 11705 (+)
Gene ID: k141_79073_9
Type: TF
Location: 11963 - 12973 (-)
Gene ID: k141_79073_10
Type: TC
Location: 13249 - 15006 (+)
Gene ID: k141_79073_11
Type: CAZyme
Location: 15083 - 16504 (+)
Gene ID: k141_79073_12
Type: TF
Location: 16699 - 17463 (-)
Gene ID: k141_79073_13
Type: sulfatase
Location: 17670 - 18722 (+)
Gene ID: k141_79073_14
Type: TC
Location: 19048 - 19530 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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