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Cluster: SW216_bin.76_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_44929 k141_44929_1 2 760 + GH25
STP k141_44929 k141_44929_2 858 2636 + SBP_bac_3
STP k141_44929 k141_44929_3 2777 4468 + SBP_bac_3
TC k141_44929 k141_44929_4 4554 5681 + 3.A.1.103.4
TC k141_44929 k141_44929_5 5693 6484 + 3.A.1.103.4
CAZyme k141_44929 k141_44929_6 6495 8954 + GT2 | GT2
CAZyme k141_44929 k141_44929_7 8971 11136 + GT2 | GT2
TC k141_44929 k141_44929_8 11225 12583 + 9.B.18.1.3
NULL(UNKNOWN) k141_44929 k141_44929_9 12686 13402 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_44929 k141_44929_10 13402 14277 + GT2
CAZyme k141_44929 k141_44929_11 14280 14987 + GT2
CAZyme k141_44929 k141_44929_12 14984 15952 + GT2
CAZyme k141_44929 k141_44929_13 16009 16701 + GT2
Gene ID: k141_44929_1
Type: CAZyme
Location: 2 - 760 (+)
Gene ID: k141_44929_2
Type: STP
Location: 858 - 2636 (+)
Gene ID: k141_44929_3
Type: STP
Location: 2777 - 4468 (+)
Gene ID: k141_44929_4
Type: TC
Location: 4554 - 5681 (+)
Gene ID: k141_44929_5
Type: TC
Location: 5693 - 6484 (+)
Gene ID: k141_44929_6
Type: CAZyme
Location: 6495 - 8954 (+)
Gene ID: k141_44929_7
Type: CAZyme
Location: 8971 - 11136 (+)
Gene ID: k141_44929_8
Type: TC
Location: 11225 - 12583 (+)
Gene ID: k141_44929_9
Type:
Location: 12686 - 13402 (+)
Gene ID: k141_44929_10
Type: CAZyme
Location: 13402 - 14277 (+)
Gene ID: k141_44929_11
Type: CAZyme
Location: 14280 - 14987 (+)
Gene ID: k141_44929_12
Type: CAZyme
Location: 14984 - 15952 (+)
Gene ID: k141_44929_13
Type: CAZyme
Location: 16009 - 16701 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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