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Cluster: SW216_bin.76_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_44926 k141_44926_68 70740 71171 + 4.A.6.1.7
pfam k141_44926 k141_44926_69 71221 71712 + PTSIIB_sorb
pfam k141_44926 k141_44926_70 71766 72605 + EII-Sor
TC k141_44926 k141_44926_71 72607 73437 + 4.A.6.1.16
NULL(UNKNOWN) k141_44926 k141_44926_72 73499 73819 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_44926 k141_44926_73 73897 74934 + GT4
pfam k141_44926 k141_44926_74 74943 75983 + LPG_synthase_TM
CAZyme k141_44926 k141_44926_75 75974 77947 + GT4
Gene ID: k141_44926_68
Type: TC
Location: 70740 - 71171 (+)
Gene ID: k141_44926_69
Type: pfam
Location: 71221 - 71712 (+)
Gene ID: k141_44926_70
Type: pfam
Location: 71766 - 72605 (+)
Gene ID: k141_44926_71
Type: TC
Location: 72607 - 73437 (+)
Gene ID: k141_44926_72
Type:
Location: 73499 - 73819 (+)
Gene ID: k141_44926_73
Type: CAZyme
Location: 73897 - 74934 (+)
Gene ID: k141_44926_74
Type: pfam
Location: 74943 - 75983 (+)
Gene ID: k141_44926_75
Type: CAZyme
Location: 75974 - 77947 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_44926_71 vegan > omnivore 2.60645 0.04185

🧭 Explore Read Mapping of CGC

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