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Cluster: SW216_bin.76_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_44926 k141_44926_25 25073 26650 + 2.A.15.2.2
TC k141_44926 k141_44926_26 26643 27920 + 2.A.1.52.2
TC k141_44926 k141_44926_27 28014 29237 + 4.B.1.1.7
pfam k141_44926 k141_44926_28 29299 29856 + EFP | EFP_N | Elong-fact-P_C
pfam k141_44926 k141_44926_29 29875 30621 + adh_short | Polysacc_synt_2 | KR | adh_short_C2
CAZyme k141_44926 k141_44926_30 30881 32293 - CE4
Gene ID: k141_44926_25
Type: TC
Location: 25073 - 26650 (+)
Gene ID: k141_44926_26
Type: TC
Location: 26643 - 27920 (+)
Gene ID: k141_44926_27
Type: TC
Location: 28014 - 29237 (+)
Gene ID: k141_44926_28
Type: pfam
Location: 29299 - 29856 (+)
Gene ID: k141_44926_29
Type: pfam
Location: 29875 - 30621 (+)
Gene ID: k141_44926_30
Type: CAZyme
Location: 30881 - 32293 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_44926_28 vegan > omnivore 1.26720 0.04185

🧭 Explore Read Mapping of CGC

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