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Cluster: SW216_bin.76_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_83898 k141_83898_29 26721 29126 - GT35
TF k141_83898 k141_83898_30 29226 29768 - Trans_reg_C
pfam k141_83898 k141_83898_31 29869 30264 - DUF956
TC k141_83898 k141_83898_32 30282 31199 - 4.A.6.1.15
TC k141_83898 k141_83898_33 31223 32041 - 4.A.6.1.15
TC k141_83898 k141_83898_34 32051 33031 - 4.A.6.1.15
pfam k141_83898 k141_83898_35 33256 34089 - PRD | PRD | CAT_RBD
TC k141_83898 k141_83898_36 34098 36191 - 4.A.1.1.14
pfam k141_83898 k141_83898_37 36277 36576 - DivIC
TC k141_83898 k141_83898_38 36590 38437 - 1.C.39.4.5
Gene ID: k141_83898_29
Type: CAZyme
Location: 26721 - 29126 (-)
Gene ID: k141_83898_30
Type: TF
Location: 29226 - 29768 (-)
Gene ID: k141_83898_31
Type: pfam
Location: 29869 - 30264 (-)
Gene ID: k141_83898_32
Type: TC
Location: 30282 - 31199 (-)
Gene ID: k141_83898_33
Type: TC
Location: 31223 - 32041 (-)
Gene ID: k141_83898_34
Type: TC
Location: 32051 - 33031 (-)
Gene ID: k141_83898_35
Type: pfam
Location: 33256 - 34089 (-)
Gene ID: k141_83898_36
Type: TC
Location: 34098 - 36191 (-)
Gene ID: k141_83898_37
Type: pfam
Location: 36277 - 36576 (-)
Gene ID: k141_83898_38
Type: TC
Location: 36590 - 38437 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_83898_32 vegan > omnivore 1.08787 0.04185
k141_83898_33 vegan > omnivore 1.28033 0.04185

🧭 Explore Read Mapping of CGC

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