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Cluster: SW214_86_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_11885 k141_11885_5 3513 5069 + 3.A.1.5.28
TC k141_11885 k141_11885_6 5126 6136 + 3.A.1.5.25
TC k141_11885 k141_11885_7 6133 7044 + 3.A.1.5.19
TC k141_11885 k141_11885_8 7031 8038 + 3.A.1.5.20
TC k141_11885 k141_11885_9 8035 8919 + 3.A.1.5.2
CAZyme k141_11885 k141_11885_10 9660 11633 + GH67
Gene ID: k141_11885_5
Type: TC
Location: 3513 - 5069 (+)
Gene ID: k141_11885_6
Type: TC
Location: 5126 - 6136 (+)
Gene ID: k141_11885_7
Type: TC
Location: 6133 - 7044 (+)
Gene ID: k141_11885_8
Type: TC
Location: 7031 - 8038 (+)
Gene ID: k141_11885_9
Type: TC
Location: 8035 - 8919 (+)
Gene ID: k141_11885_10
Type: CAZyme
Location: 9660 - 11633 (+)

Taxonomic Lineage

Domain
Bacteria
Family
UMGS1384

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_11885_5 vegetarian > vegan 1.16026 0.04449

🧭 Explore Read Mapping of CGC

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