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Cluster: SW209_43_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_14778 k141_14778_30 26374 28068 + 4.A.3.1.1
STP k141_14778 k141_14778_31 28231 28626 + DeoRC
pfam k141_14778 k141_14778_32 28732 29964 - Fic
CAZyme k141_14778 k141_14778_33 30331 31752 - GH1
TC k141_14778 k141_14778_34 31827 33605 - 4.A.3.1.1
TF k141_14778 k141_14778_35 33890 34891 + LacI
TC k141_14778 k141_14778_36 35305 37065 - 4.A.3.1.1
CAZyme k141_14778 k141_14778_37 37242 38684 - GH1
TF k141_14778 k141_14778_38 39026 40063 + LacI
CAZyme k141_14778 k141_14778_39 40340 41779 - GH1
TC k141_14778 k141_14778_40 41846 43624 - 4.A.3.1.1
TF k141_14778 k141_14778_41 43982 44986 + LacI
TC k141_14778 k141_14778_42 45201 45539 + 4.A.3.1.2
Gene ID: k141_14778_30
Type: TC
Location: 26374 - 28068 (+)
Gene ID: k141_14778_31
Type: STP
Location: 28231 - 28626 (+)
Gene ID: k141_14778_32
Type: pfam
Location: 28732 - 29964 (-)
Gene ID: k141_14778_33
Type: CAZyme
Location: 30331 - 31752 (-)
Gene ID: k141_14778_34
Type: TC
Location: 31827 - 33605 (-)
Gene ID: k141_14778_35
Type: TF
Location: 33890 - 34891 (+)
Gene ID: k141_14778_36
Type: TC
Location: 35305 - 37065 (-)
Gene ID: k141_14778_37
Type: CAZyme
Location: 37242 - 38684 (-)
Gene ID: k141_14778_38
Type: TF
Location: 39026 - 40063 (+)
Gene ID: k141_14778_39
Type: CAZyme
Location: 40340 - 41779 (-)
Gene ID: k141_14778_40
Type: TC
Location: 41846 - 43624 (-)
Gene ID: k141_14778_41
Type: TF
Location: 43982 - 44986 (+)
Gene ID: k141_14778_42
Type: TC
Location: 45201 - 45539 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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