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Cluster: SW200_maxbin.009_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_12484 k141_12484_259 298053 299222 - CE9
STP k141_12484 k141_12484_260 299341 300507 - SIS | SIS
TF k141_12484 k141_12484_261 300622 301353 - GntR
TC k141_12484 k141_12484_262 301538 302620 - 4.A.6.1.4
TC k141_12484 k141_12484_263 302610 303410 - 4.A.6.1.4
TC k141_12484 k141_12484_264 303501 303983 - 4.A.6.1.4
pfam k141_12484 k141_12484_265 304020 304301 - YajC
TC k141_12484 k141_12484_266 304301 304744 - 4.A.6.1.16
Gene ID: k141_12484_259
Type: CAZyme
Location: 298053 - 299222 (-)
Gene ID: k141_12484_260
Type: STP
Location: 299341 - 300507 (-)
Gene ID: k141_12484_261
Type: TF
Location: 300622 - 301353 (-)
Gene ID: k141_12484_262
Type: TC
Location: 301538 - 302620 (-)
Gene ID: k141_12484_263
Type: TC
Location: 302610 - 303410 (-)
Gene ID: k141_12484_264
Type: TC
Location: 303501 - 303983 (-)
Gene ID: k141_12484_265
Type: pfam
Location: 304020 - 304301 (-)
Gene ID: k141_12484_266
Type: TC
Location: 304301 - 304744 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_12484_265 vegan > omnivore 1.08651 0.00566

🧭 Explore Read Mapping of CGC

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