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Cluster: SW192_maxbin.014_sub_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_5258 k141_5258_64 69240 70682 + 3.A.1.8.1
TC k141_5258 k141_5258_65 70686 71756 + 3.A.1.1.3
pfam k141_5258 k141_5258_66 72207 73490 + HGD-D
TC k141_5258 k141_5258_67 73675 75285 + 3.A.1.5.11
TC k141_5258 k141_5258_68 75372 76325 + 3.A.1.5.11
TC k141_5258 k141_5258_69 76325 77152 + 3.A.1.5.39
TC k141_5258 k141_5258_70 77156 78154 + 3.A.1.5.35
TC k141_5258 k141_5258_71 78141 78926 + 3.A.1.5.36
pfam k141_5258 k141_5258_72 79004 80167 + HGD-D
pfam k141_5258 k141_5258_73 80219 80983 + BcrAD_BadFG
CAZyme k141_5258 k141_5258_74 80998 82242 + GT4
Gene ID: k141_5258_64
Type: TC
Location: 69240 - 70682 (+)
Gene ID: k141_5258_65
Type: TC
Location: 70686 - 71756 (+)
Gene ID: k141_5258_66
Type: pfam
Location: 72207 - 73490 (+)
Gene ID: k141_5258_67
Type: TC
Location: 73675 - 75285 (+)
Gene ID: k141_5258_68
Type: TC
Location: 75372 - 76325 (+)
Gene ID: k141_5258_69
Type: TC
Location: 76325 - 77152 (+)
Gene ID: k141_5258_70
Type: TC
Location: 77156 - 78154 (+)
Gene ID: k141_5258_71
Type: TC
Location: 78141 - 78926 (+)
Gene ID: k141_5258_72
Type: pfam
Location: 79004 - 80167 (+)
Gene ID: k141_5258_73
Type: pfam
Location: 80219 - 80983 (+)
Gene ID: k141_5258_74
Type: CAZyme
Location: 80998 - 82242 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_5258_67 vegan > omnivore 3.14657 0.01287
k141_5258_68 vegan > omnivore 2.47541 0.01287
k141_5258_69 vegan > omnivore 2.70246 0.01287
k141_5258_70 vegan > omnivore 1.15107 0.01287
k141_5258_71 vegan > omnivore 2.50151 0.01287

🧭 Explore Read Mapping of CGC

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