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Cluster: SW192_maxbin.014_sub_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_12252 k141_12252_30 34289 34627 - 4.A.3.1.2
TF k141_12252 k141_12252_31 34841 35845 - LacI
TC k141_12252 k141_12252_32 36202 37974 + 4.A.3.1.1
CAZyme k141_12252 k141_12252_33 38171 39610 + GH1
TF k141_12252 k141_12252_34 40040 41050 - LacI
TC k141_12252 k141_12252_35 41327 43105 + 4.A.3.1.1
CAZyme k141_12252 k141_12252_36 43181 44602 + GH1
pfam k141_12252 k141_12252_37 44970 46202 + Fic
STP k141_12252 k141_12252_38 46251 46580 - DeoRC
TC k141_12252 k141_12252_39 46743 48437 - 4.A.3.1.1
Gene ID: k141_12252_30
Type: TC
Location: 34289 - 34627 (-)
Gene ID: k141_12252_31
Type: TF
Location: 34841 - 35845 (-)
Gene ID: k141_12252_32
Type: TC
Location: 36202 - 37974 (+)
Gene ID: k141_12252_33
Type: CAZyme
Location: 38171 - 39610 (+)
Gene ID: k141_12252_34
Type: TF
Location: 40040 - 41050 (-)
Gene ID: k141_12252_35
Type: TC
Location: 41327 - 43105 (+)
Gene ID: k141_12252_36
Type: CAZyme
Location: 43181 - 44602 (+)
Gene ID: k141_12252_37
Type: pfam
Location: 44970 - 46202 (+)
Gene ID: k141_12252_38
Type: STP
Location: 46251 - 46580 (-)
Gene ID: k141_12252_39
Type: TC
Location: 46743 - 48437 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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