Cluster: SW192_maxbin.014_sub_CGC1
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate:
- Genome ID: SW192_maxbin.014_sub
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_52932 | k141_52932_5 | 4093 | 5127 | - | GT2 |
| NULL(UNKNOWN) | k141_52932 | k141_52932_6 | 5375 | 5503 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_52932 | k141_52932_7 | 5516 | 6511 | - | GT2 |
| pfam | k141_52932 | k141_52932_8 | 6504 | 7619 | - | EpsG |
| CAZyme | k141_52932 | k141_52932_9 | 7815 | 8807 | - | GT2 |
| CAZyme | k141_52932 | k141_52932_10 | 8812 | 9645 | - | GT2 |
| TC | k141_52932 | k141_52932_11 | 9646 | 10311 | - | 9.B.18.1.2 |
Gene ID: k141_52932_5
Type: CAZyme
Location: 4093 - 5127 (-)
Type: CAZyme
Location: 4093 - 5127 (-)
Gene ID: k141_52932_6
Type:
Location: 5375 - 5503 (-)
Type:
Location: 5375 - 5503 (-)
Gene ID: k141_52932_7
Type: CAZyme
Location: 5516 - 6511 (-)
Type: CAZyme
Location: 5516 - 6511 (-)
Gene ID: k141_52932_8
Type: pfam
Location: 6504 - 7619 (-)
Type: pfam
Location: 6504 - 7619 (-)
Gene ID: k141_52932_9
Type: CAZyme
Location: 7815 - 8807 (-)
Type: CAZyme
Location: 7815 - 8807 (-)
Gene ID: k141_52932_10
Type: CAZyme
Location: 8812 - 9645 (-)
Type: CAZyme
Location: 8812 - 9645 (-)
Gene ID: k141_52932_11
Type: TC
Location: 9646 - 10311 (-)
Type: TC
Location: 9646 - 10311 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.