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Cluster: SW192_bin.22_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_73810 k141_73810_12 11427 12347 + 3.A.11.1.4
pfam k141_73810 k141_73810_13 12385 12597 + DUF3006
pfam k141_73810 k141_73810_14 12907 13914 + tRNA-synt_2 | AsnA
TC k141_73810 k141_73810_15 13924 14583 + 1.A.62.2.1
CAZyme k141_73810 k141_73810_16 14656 16500 - GH13_4
CAZyme k141_73810 k141_73810_17 16529 18763 - GH36
TC k141_73810 k141_73810_18 18859 19695 - 3.A.1.1.34
TC k141_73810 k141_73810_19 19708 20589 - 3.A.1.1.25
STP k141_73810 k141_73810_20 20650 21951 - SBP_bac_1
TF k141_73810 k141_73810_21 22240 23100 + HTH_AraC | HTH_AraC
TC k141_73810 k141_73810_22 23103 24773 - 2.A.58.2.2
Gene ID: k141_73810_12
Type: TC
Location: 11427 - 12347 (+)
Gene ID: k141_73810_13
Type: pfam
Location: 12385 - 12597 (+)
Gene ID: k141_73810_14
Type: pfam
Location: 12907 - 13914 (+)
Gene ID: k141_73810_15
Type: TC
Location: 13924 - 14583 (+)
Gene ID: k141_73810_16
Type: CAZyme
Location: 14656 - 16500 (-)
Gene ID: k141_73810_17
Type: CAZyme
Location: 16529 - 18763 (-)
Gene ID: k141_73810_18
Type: TC
Location: 18859 - 19695 (-)
Gene ID: k141_73810_19
Type: TC
Location: 19708 - 20589 (-)
Gene ID: k141_73810_20
Type: STP
Location: 20650 - 21951 (-)
Gene ID: k141_73810_21
Type: TF
Location: 22240 - 23100 (+)
Gene ID: k141_73810_22
Type: TC
Location: 23103 - 24773 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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