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Cluster: SW192_bin.22_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_50255 k141_50255_2 1796 3610 + 8.A.59.2.1
pfam k141_50255 k141_50255_3 3846 4079 + NifU
CAZyme k141_50255 k141_50255_4 4112 7111 + GH38
CAZyme k141_50255 k141_50255_5 7149 8651 + GH51_1
pfam k141_50255 k141_50255_6 8821 9132 + Trns_repr_metal
TC k141_50255 k141_50255_7 9289 11832 + 3.A.3.5.15
TC k141_50255 k141_50255_8 12001 13164 - 2.A.1.60.3
TF k141_50255 k141_50255_9 13294 14223 + HTH_AraC
TC k141_50255 k141_50255_10 14294 15613 - 2.A.66.1.33
TF k141_50255 k141_50255_11 15800 16702 + HTH_1
TC k141_50255 k141_50255_12 16718 18019 - 2.A.27.2.2
Gene ID: k141_50255_2
Type: TC
Location: 1796 - 3610 (+)
Gene ID: k141_50255_3
Type: pfam
Location: 3846 - 4079 (+)
Gene ID: k141_50255_4
Type: CAZyme
Location: 4112 - 7111 (+)
Gene ID: k141_50255_5
Type: CAZyme
Location: 7149 - 8651 (+)
Gene ID: k141_50255_6
Type: pfam
Location: 8821 - 9132 (+)
Gene ID: k141_50255_7
Type: TC
Location: 9289 - 11832 (+)
Gene ID: k141_50255_8
Type: TC
Location: 12001 - 13164 (-)
Gene ID: k141_50255_9
Type: TF
Location: 13294 - 14223 (+)
Gene ID: k141_50255_10
Type: TC
Location: 14294 - 15613 (-)
Gene ID: k141_50255_11
Type: TF
Location: 15800 - 16702 (+)
Gene ID: k141_50255_12
Type: TC
Location: 16718 - 18019 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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