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Cluster: SW192_bin.22_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_81339 k141_81339_50 42928 44349 + 2.A.35.1.2
STP k141_81339 k141_81339_51 44559 44771 + FeoA
STP k141_81339 k141_81339_52 44806 45027 + FeoA
TC k141_81339 k141_81339_53 45116 47584 + 9.A.8.1.6
TF k141_81339 k141_81339_54 47822 48112 + FUR
STP k141_81339 k141_81339_55 48133 48516 + HMA
TC k141_81339 k141_81339_56 48617 48925 + 3.A.3.32.3
TC k141_81339 k141_81339_57 48935 49180 + 3.A.3.32.3
TC k141_81339 k141_81339_58 49435 50457 + 9.A.11.1.1
pfam k141_81339 k141_81339_59 50484 50837 + SpoVAC_SpoVAEB
CAZyme k141_81339 k141_81339_60 50967 53648 - GT51
Gene ID: k141_81339_50
Type: TC
Location: 42928 - 44349 (+)
Gene ID: k141_81339_51
Type: STP
Location: 44559 - 44771 (+)
Gene ID: k141_81339_52
Type: STP
Location: 44806 - 45027 (+)
Gene ID: k141_81339_53
Type: TC
Location: 45116 - 47584 (+)
Gene ID: k141_81339_54
Type: TF
Location: 47822 - 48112 (+)
Gene ID: k141_81339_55
Type: STP
Location: 48133 - 48516 (+)
Gene ID: k141_81339_56
Type: TC
Location: 48617 - 48925 (+)
Gene ID: k141_81339_57
Type: TC
Location: 48935 - 49180 (+)
Gene ID: k141_81339_58
Type: TC
Location: 49435 - 50457 (+)
Gene ID: k141_81339_59
Type: pfam
Location: 50484 - 50837 (+)
Gene ID: k141_81339_60
Type: CAZyme
Location: 50967 - 53648 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_81339_52 vegetarian > omnivore 2.12098 0.02923
k141_81339_52 vegetarian > vegan 1.52797 0.01560

🧭 Explore Read Mapping of CGC

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