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Cluster: SW192_bin.22_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_24568 k141_24568_49 54993 56075 + 2.A.56.1.9
pfam k141_24568 k141_24568_50 56167 56661 + DctQ
TC k141_24568 k141_24568_51 56658 57938 + 2.A.56.1.3
pfam k141_24568 k141_24568_52 57981 59057 + GFO_IDH_MocA | GFO_IDH_MocA_C | GFO_IDH_MocA_C3
CAZyme k141_24568 k141_24568_53 59066 60223 + GH109
TF k141_24568 k141_24568_54 60308 60856 - SpoVT_AbrB
pfam k141_24568 k141_24568_55 60955 62004 - Radical_SAM
TC k141_24568 k141_24568_56 62087 62881 - 3.A.1.14.11
TC k141_24568 k141_24568_57 63011 64030 - 3.A.1.14.11
Gene ID: k141_24568_49
Type: TC
Location: 54993 - 56075 (+)
Gene ID: k141_24568_50
Type: pfam
Location: 56167 - 56661 (+)
Gene ID: k141_24568_51
Type: TC
Location: 56658 - 57938 (+)
Gene ID: k141_24568_52
Type: pfam
Location: 57981 - 59057 (+)
Gene ID: k141_24568_53
Type: CAZyme
Location: 59066 - 60223 (+)
Gene ID: k141_24568_54
Type: TF
Location: 60308 - 60856 (-)
Gene ID: k141_24568_55
Type: pfam
Location: 60955 - 62004 (-)
Gene ID: k141_24568_56
Type: TC
Location: 62087 - 62881 (-)
Gene ID: k141_24568_57
Type: TC
Location: 63011 - 64030 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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