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Cluster: SW192_bin.22_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_61148 k141_61148_4 4728 7973 - GH2
pfam k141_61148 k141_61148_5 8110 9876 - PGM_PMM_IV | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III
CAZyme k141_61148 k141_61148_6 9938 12349 - GH28
NULL(UNKNOWN) k141_61148 k141_61148_7 12370 14811 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_61148 k141_61148_8 15014 15880 - 3.A.1.1.6
TC k141_61148 k141_61148_9 15895 16815 - 3.A.1.1.11
Gene ID: k141_61148_4
Type: CAZyme
Location: 4728 - 7973 (-)
Gene ID: k141_61148_5
Type: pfam
Location: 8110 - 9876 (-)
Gene ID: k141_61148_6
Type: CAZyme
Location: 9938 - 12349 (-)
Gene ID: k141_61148_7
Type:
Location: 12370 - 14811 (-)
Gene ID: k141_61148_8
Type: TC
Location: 15014 - 15880 (-)
Gene ID: k141_61148_9
Type: TC
Location: 15895 - 16815 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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