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Cluster: SW192_bin.22_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_13248 k141_13248_10 11697 12662 - GT2
TC k141_13248 k141_13248_11 12946 14397 + 2.A.66.2.16
pfam k141_13248 k141_13248_12 14522 15400 + LicD
peptidase k141_13248 k141_13248_13 15463 16947 - C82.UNA
CAZyme k141_13248 k141_13248_14 17080 18096 + GT8
CAZyme k141_13248 k141_13248_15 18122 19033 + GT2
CAZyme k141_13248 k141_13248_16 19026 19712 + GT2
NULL(UNKNOWN) k141_13248 k141_13248_17 19719 21047 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_13248 k141_13248_18 21016 21969 + GT2
Gene ID: k141_13248_10
Type: CAZyme
Location: 11697 - 12662 (-)
Gene ID: k141_13248_11
Type: TC
Location: 12946 - 14397 (+)
Gene ID: k141_13248_12
Type: pfam
Location: 14522 - 15400 (+)
Gene ID: k141_13248_13
Type: peptidase
Location: 15463 - 16947 (-)
Gene ID: k141_13248_14
Type: CAZyme
Location: 17080 - 18096 (+)
Gene ID: k141_13248_15
Type: CAZyme
Location: 18122 - 19033 (+)
Gene ID: k141_13248_16
Type: CAZyme
Location: 19026 - 19712 (+)
Gene ID: k141_13248_17
Type:
Location: 19719 - 21047 (+)
Gene ID: k141_13248_18
Type: CAZyme
Location: 21016 - 21969 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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