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Cluster: SW180_maxbin.026_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_113842 k141_113842_8 5068 6834 - 2.A.21.9.1
TF k141_113842 k141_113842_9 6920 7609 + Trans_reg_C
CAZyme k141_113842 k141_113842_10 7628 9211 + GH77
CAZyme k141_113842 k141_113842_11 9195 11072 - GH13_39
pfam k141_113842 k141_113842_12 11099 12223 - NTP_transferase | Hexapep_GlmU
pfam k141_113842 k141_113842_13 12237 13424 - NTP_transferase | Hexapep_GlmU
CAZyme k141_113842 k141_113842_14 13421 15352 - GH13_9
CAZyme k141_113842 k141_113842_15 15562 17025 + GT5
CAZyme k141_113842 k141_113842_16 17041 19536 + GT35
Gene ID: k141_113842_8
Type: TC
Location: 5068 - 6834 (-)
Gene ID: k141_113842_9
Type: TF
Location: 6920 - 7609 (+)
Gene ID: k141_113842_10
Type: CAZyme
Location: 7628 - 9211 (+)
Gene ID: k141_113842_11
Type: CAZyme
Location: 9195 - 11072 (-)
Gene ID: k141_113842_12
Type: pfam
Location: 11099 - 12223 (-)
Gene ID: k141_113842_13
Type: pfam
Location: 12237 - 13424 (-)
Gene ID: k141_113842_14
Type: CAZyme
Location: 13421 - 15352 (-)
Gene ID: k141_113842_15
Type: CAZyme
Location: 15562 - 17025 (+)
Gene ID: k141_113842_16
Type: CAZyme
Location: 17041 - 19536 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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