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Cluster: SW180_99_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_11151 k141_11151_16 12809 14548 + 8.A.59.2.1
TF k141_11151 k141_11151_17 14541 15920 + HTH_AraC | HTH_AraC
TC k141_11151 k141_11151_18 16020 17042 + 3.A.1.1.10
TC k141_11151 k141_11151_19 17045 17965 + 3.A.1.1.29
NULL(UNKNOWN) k141_11151 k141_11151_20 17995 19689 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_11151 k141_11151_21 19707 21608 + GH136
CAZyme k141_11151 k141_11151_22 21619 23865 + GH94
TC k141_11151 k141_11151_23 23881 25065 + 3.A.1.1.24
CAZyme k141_11151 k141_11151_24 25075 27150 + GH36
CAZyme k141_11151 k141_11151_25 27140 28057 + GH43_24
Gene ID: k141_11151_16
Type: TC
Location: 12809 - 14548 (+)
Gene ID: k141_11151_17
Type: TF
Location: 14541 - 15920 (+)
Gene ID: k141_11151_18
Type: TC
Location: 16020 - 17042 (+)
Gene ID: k141_11151_19
Type: TC
Location: 17045 - 17965 (+)
Gene ID: k141_11151_20
Type:
Location: 17995 - 19689 (+)
Gene ID: k141_11151_21
Type: CAZyme
Location: 19707 - 21608 (+)
Gene ID: k141_11151_22
Type: CAZyme
Location: 21619 - 23865 (+)
Gene ID: k141_11151_23
Type: TC
Location: 23881 - 25065 (+)
Gene ID: k141_11151_24
Type: CAZyme
Location: 25075 - 27150 (+)
Gene ID: k141_11151_25
Type: CAZyme
Location: 27140 - 28057 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_I
→
Class
Bacilli_A
→
Order
RFN20
→
Family
CAG-826
→
Genus
CAG-826
→
Species
CAG-826 sp000437235

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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