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Cluster: SW180_99_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_329870 k141_329870_315 349092 350144 - 3.A.1.1.22
NULL(UNKNOWN) k141_329870 k141_329870_316 350137 351006 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_329870 k141_329870_317 351011 352783 - GH2
TF k141_329870 k141_329870_318 352929 353858 + HTH_AraC | HTH_AraC
pfam k141_329870 k141_329870_319 353989 354456 + GreA_GreB | GreA_GreB_N
TC k141_329870 k141_329870_320 354529 355068 + 3.A.11.1.1
TC k141_329870 k141_329870_321 355065 357143 + 3.A.11.2.1
pfam k141_329870 k141_329870_322 357103 358062 + DNA_pol3_delta | DNA_pol3_delta_C
NULL(UNKNOWN) k141_329870 k141_329870_323 358192 358368 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_329870 k141_329870_324 358428 359525 + GT2
Gene ID: k141_329870_315
Type: TC
Location: 349092 - 350144 (-)
Gene ID: k141_329870_316
Type:
Location: 350137 - 351006 (-)
Gene ID: k141_329870_317
Type: CAZyme
Location: 351011 - 352783 (-)
Gene ID: k141_329870_318
Type: TF
Location: 352929 - 353858 (+)
Gene ID: k141_329870_319
Type: pfam
Location: 353989 - 354456 (+)
Gene ID: k141_329870_320
Type: TC
Location: 354529 - 355068 (+)
Gene ID: k141_329870_321
Type: TC
Location: 355065 - 357143 (+)
Gene ID: k141_329870_322
Type: pfam
Location: 357103 - 358062 (+)
Gene ID: k141_329870_323
Type:
Location: 358192 - 358368 (+)
Gene ID: k141_329870_324
Type: CAZyme
Location: 358428 - 359525 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_I
→
Class
Bacilli_A
→
Order
RFN20
→
Family
CAG-826
→
Genus
CAG-826
→
Species
CAG-826 sp000437235

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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