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Cluster: SW178_7_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_97266 k141_97266_27 26074 26688 - 3.A.1.5.10
TC k141_97266 k141_97266_28 26678 27613 - 3.A.1.5.27
TC k141_97266 k141_97266_29 27645 28469 - 3.A.1.5.2
TC k141_97266 k141_97266_30 28466 29461 - 3.A.1.5.20
TC k141_97266 k141_97266_31 29693 31297 - 3.A.1.5.20
CAZyme k141_97266 k141_97266_32 31522 33291 - GH3
pfam k141_97266 k141_97266_33 33390 34232 - HAD_2
TC k141_97266 k141_97266_34 34370 35098 - 3.A.1.5.20
TC k141_97266 k141_97266_35 35095 35970 - 3.A.1.5.18
TC k141_97266 k141_97266_36 35970 36809 - 3.A.1.5.11
TC k141_97266 k141_97266_37 36816 37754 - 3.A.1.5.11
TC k141_97266 k141_97266_38 37822 39366 - 3.A.1.5.11
Gene ID: k141_97266_27
Type: TC
Location: 26074 - 26688 (-)
Gene ID: k141_97266_28
Type: TC
Location: 26678 - 27613 (-)
Gene ID: k141_97266_29
Type: TC
Location: 27645 - 28469 (-)
Gene ID: k141_97266_30
Type: TC
Location: 28466 - 29461 (-)
Gene ID: k141_97266_31
Type: TC
Location: 29693 - 31297 (-)
Gene ID: k141_97266_32
Type: CAZyme
Location: 31522 - 33291 (-)
Gene ID: k141_97266_33
Type: pfam
Location: 33390 - 34232 (-)
Gene ID: k141_97266_34
Type: TC
Location: 34370 - 35098 (-)
Gene ID: k141_97266_35
Type: TC
Location: 35095 - 35970 (-)
Gene ID: k141_97266_36
Type: TC
Location: 35970 - 36809 (-)
Gene ID: k141_97266_37
Type: TC
Location: 36816 - 37754 (-)
Gene ID: k141_97266_38
Type: TC
Location: 37822 - 39366 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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