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Cluster: SW178_7_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_97266 k141_97266_1 95 2245 - GH78
NULL(UNKNOWN) k141_97266 k141_97266_2 2385 2516 - NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_97266 k141_97266_3 2552 3367 - PDDEXK_2
TC k141_97266 k141_97266_4 3710 5134 - 2.A.2.3.6
STP k141_97266 k141_97266_5 5322 7268 - Pyr_redox_2
pfam k141_97266 k141_97266_6 7413 7958 - Uma2
TC k141_97266 k141_97266_7 8198 9556 - 2.A.2.3.2
pfam k141_97266 k141_97266_8 9572 10003 - CGDB
pfam k141_97266 k141_97266_9 10019 10897 - AP_endonuc_2
CAZyme k141_97266 k141_97266_10 10910 12016 - GH179
pfam k141_97266 k141_97266_11 12042 12431 - CGDB
pfam k141_97266 k141_97266_12 12435 13457 - AP_endonuc_2
CAZyme k141_97266 k141_97266_13 13624 15990 - GH39
Gene ID: k141_97266_1
Type: CAZyme
Location: 95 - 2245 (-)
Gene ID: k141_97266_2
Type:
Location: 2385 - 2516 (-)
Gene ID: k141_97266_3
Type: pfam
Location: 2552 - 3367 (-)
Gene ID: k141_97266_4
Type: TC
Location: 3710 - 5134 (-)
Gene ID: k141_97266_5
Type: STP
Location: 5322 - 7268 (-)
Gene ID: k141_97266_6
Type: pfam
Location: 7413 - 7958 (-)
Gene ID: k141_97266_7
Type: TC
Location: 8198 - 9556 (-)
Gene ID: k141_97266_8
Type: pfam
Location: 9572 - 10003 (-)
Gene ID: k141_97266_9
Type: pfam
Location: 10019 - 10897 (-)
Gene ID: k141_97266_10
Type: CAZyme
Location: 10910 - 12016 (-)
Gene ID: k141_97266_11
Type: pfam
Location: 12042 - 12431 (-)
Gene ID: k141_97266_12
Type: pfam
Location: 12435 - 13457 (-)
Gene ID: k141_97266_13
Type: CAZyme
Location: 13624 - 15990 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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