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Cluster: SW178_7_CGC64

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_51973 k141_51973_13 10294 12102 + 3.A.1.21.1
TC k141_51973 k141_51973_14 12095 13882 + 3.A.1.21.1
TF k141_51973 k141_51973_15 13886 14863 - LacI
STP k141_51973 k141_51973_16 15228 16556 + SBP_bac_1
TC k141_51973 k141_51973_17 16618 17487 + 3.A.1.1.45
TC k141_51973 k141_51973_18 17487 18308 + 3.A.1.1.45
CAZyme k141_51973 k141_51973_19 18349 19992 + GH13_31
CAZyme k141_51973 k141_51973_20 20097 21194 - GH43_24
pfam k141_51973 k141_51973_21 21210 21416 - Bac_rhamnosid_C
CAZyme k141_51973 k141_51973_22 21561 23783 - CBM67 | GH78
CAZyme k141_51973 k141_51973_23 23802 26159 - GH2
CAZyme k141_51973 k141_51973_24 26197 28536 - GH3
TC k141_51973 k141_51973_25 28616 30301 - 2.A.2.3.3
Gene ID: k141_51973_13
Type: TC
Location: 10294 - 12102 (+)
Gene ID: k141_51973_14
Type: TC
Location: 12095 - 13882 (+)
Gene ID: k141_51973_15
Type: TF
Location: 13886 - 14863 (-)
Gene ID: k141_51973_16
Type: STP
Location: 15228 - 16556 (+)
Gene ID: k141_51973_17
Type: TC
Location: 16618 - 17487 (+)
Gene ID: k141_51973_18
Type: TC
Location: 17487 - 18308 (+)
Gene ID: k141_51973_19
Type: CAZyme
Location: 18349 - 19992 (+)
Gene ID: k141_51973_20
Type: CAZyme
Location: 20097 - 21194 (-)
Gene ID: k141_51973_21
Type: pfam
Location: 21210 - 21416 (-)
Gene ID: k141_51973_22
Type: CAZyme
Location: 21561 - 23783 (-)
Gene ID: k141_51973_23
Type: CAZyme
Location: 23802 - 26159 (-)
Gene ID: k141_51973_24
Type: CAZyme
Location: 26197 - 28536 (-)
Gene ID: k141_51973_25
Type: TC
Location: 28616 - 30301 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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