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Cluster: SW178_7_CGC61

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_47274 k141_47274_30 28719 31223 - GH3
CAZyme k141_47274 k141_47274_31 31226 33976 - GH3
CAZyme k141_47274 k141_47274_32 34013 35215 - GH43_28
CAZyme k141_47274 k141_47274_33 35218 35817 - GH43_28
TC k141_47274 k141_47274_34 35844 37250 - 2.A.2.3.3
CAZyme k141_47274 k141_47274_35 37273 39498 - GH2
pfam k141_47274 k141_47274_36 39910 40575 - Glyco_hydro_3_C
CAZyme k141_47274 k141_47274_37 40629 42125 - GH3
CAZyme k141_47274 k141_47274_38 42149 44590 - GH2
Gene ID: k141_47274_30
Type: CAZyme
Location: 28719 - 31223 (-)
Gene ID: k141_47274_31
Type: CAZyme
Location: 31226 - 33976 (-)
Gene ID: k141_47274_32
Type: CAZyme
Location: 34013 - 35215 (-)
Gene ID: k141_47274_33
Type: CAZyme
Location: 35218 - 35817 (-)
Gene ID: k141_47274_34
Type: TC
Location: 35844 - 37250 (-)
Gene ID: k141_47274_35
Type: CAZyme
Location: 37273 - 39498 (-)
Gene ID: k141_47274_36
Type: pfam
Location: 39910 - 40575 (-)
Gene ID: k141_47274_37
Type: CAZyme
Location: 40629 - 42125 (-)
Gene ID: k141_47274_38
Type: CAZyme
Location: 42149 - 44590 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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