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Cluster: SW178_7_CGC56

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_84971 k141_84971_37 40931 41896 + 3.A.1.1.10
TC k141_84971 k141_84971_38 41912 42856 + 3.A.1.1.9
CAZyme k141_84971 k141_84971_39 42999 46094 - GH2
TF k141_84971 k141_84971_40 46249 47181 + HTH_AraC | HTH_AraC
NULL(UNKNOWN) k141_84971 k141_84971_41 47183 47695 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_84971 k141_84971_42 48021 49346 + 3.A.1.1.4
TC k141_84971 k141_84971_43 49461 50351 + 3.A.1.1.4
TC k141_84971 k141_84971_44 50344 51174 + 3.A.1.1.4
NULL(UNKNOWN) k141_84971 k141_84971_45 51295 53127 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) k141_84971 k141_84971_46 53100 53318 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_84971 k141_84971_47 53422 54543 - GH53
Gene ID: k141_84971_37
Type: TC
Location: 40931 - 41896 (+)
Gene ID: k141_84971_38
Type: TC
Location: 41912 - 42856 (+)
Gene ID: k141_84971_39
Type: CAZyme
Location: 42999 - 46094 (-)
Gene ID: k141_84971_40
Type: TF
Location: 46249 - 47181 (+)
Gene ID: k141_84971_41
Type:
Location: 47183 - 47695 (+)
Gene ID: k141_84971_42
Type: TC
Location: 48021 - 49346 (+)
Gene ID: k141_84971_43
Type: TC
Location: 49461 - 50351 (+)
Gene ID: k141_84971_44
Type: TC
Location: 50344 - 51174 (+)
Gene ID: k141_84971_45
Type:
Location: 51295 - 53127 (+)
Gene ID: k141_84971_46
Type:
Location: 53100 - 53318 (+)
Gene ID: k141_84971_47
Type: CAZyme
Location: 53422 - 54543 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_84971_43 vegan > omnivore 2.42893 0.02706
k141_84971_44 vegan > omnivore 1.93653 0.02706

🧭 Explore Read Mapping of CGC

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