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Cluster: SW178_7_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_57027 k141_57027_107 120845 121531 + 3.A.1.140.1
pfam k141_57027 k141_57027_108 121521 122474 + FtsX | FtsX_ECD
STP k141_57027 k141_57027_109 122547 123737 + Peptidase_M23
TC k141_57027 k141_57027_110 123819 125126 + 9.B.174.1.1
TF k141_57027 k141_57027_111 125123 126391 - HTH_AraC | HTH_AraC
NULL(UNKNOWN) k141_57027 k141_57027_112 126496 126723 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_57027 k141_57027_113 126918 128240 + GH1
sulfatase k141_57027 k141_57027_114 128264 129208 + S1_62
NULL(UNKNOWN) k141_57027 k141_57027_115 129235 129330 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_57027 k141_57027_116 129278 131983 + CBM67 | GH78
Gene ID: k141_57027_107
Type: TC
Location: 120845 - 121531 (+)
Gene ID: k141_57027_108
Type: pfam
Location: 121521 - 122474 (+)
Gene ID: k141_57027_109
Type: STP
Location: 122547 - 123737 (+)
Gene ID: k141_57027_110
Type: TC
Location: 123819 - 125126 (+)
Gene ID: k141_57027_111
Type: TF
Location: 125123 - 126391 (-)
Gene ID: k141_57027_112
Type:
Location: 126496 - 126723 (-)
Gene ID: k141_57027_113
Type: CAZyme
Location: 126918 - 128240 (+)
Gene ID: k141_57027_114
Type: sulfatase
Location: 128264 - 129208 (+)
Gene ID: k141_57027_115
Type:
Location: 129235 - 129330 (+)
Gene ID: k141_57027_116
Type: CAZyme
Location: 129278 - 131983 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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