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Cluster: SW178_7_CGC48

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_46665 k141_46665_2 878 1552 - 9.B.100.1.1
NULL(UNKNOWN) k141_46665 k141_46665_3 1581 2792 - NULL(UNKNOWN)
[View Structural Homologs]
STP k141_46665 k141_46665_4 3017 4066 + ATPase_2
TC k141_46665 k141_46665_5 4397 4981 + 2.A.107.1.2
TC k141_46665 k141_46665_6 5047 6081 + 2.A.19.5.3
pfam k141_46665 k141_46665_7 6230 7804 - PDDEXK_9 | AAA-ATPase_like
pfam k141_46665 k141_46665_8 7827 8957 - Aldo_ket_red | Fer4_9 | Fer4_10 | Fer4_17
TC k141_46665 k141_46665_9 9139 10503 + 2.A.66.1.22
CAZyme k141_46665 k141_46665_10 10523 13018 - GH2
CAZyme k141_46665 k141_46665_11 13126 15600 - GH2
TF k141_46665 k141_46665_12 15750 16874 + HTH_AraC
TC k141_46665 k141_46665_13 16921 18294 - 2.A.2.3.3
CAZyme k141_46665 k141_46665_14 18516 20597 - GH3
Gene ID: k141_46665_2
Type: TC
Location: 878 - 1552 (-)
Gene ID: k141_46665_3
Type:
Location: 1581 - 2792 (-)
Gene ID: k141_46665_4
Type: STP
Location: 3017 - 4066 (+)
Gene ID: k141_46665_5
Type: TC
Location: 4397 - 4981 (+)
Gene ID: k141_46665_6
Type: TC
Location: 5047 - 6081 (+)
Gene ID: k141_46665_7
Type: pfam
Location: 6230 - 7804 (-)
Gene ID: k141_46665_8
Type: pfam
Location: 7827 - 8957 (-)
Gene ID: k141_46665_9
Type: TC
Location: 9139 - 10503 (+)
Gene ID: k141_46665_10
Type: CAZyme
Location: 10523 - 13018 (-)
Gene ID: k141_46665_11
Type: CAZyme
Location: 13126 - 15600 (-)
Gene ID: k141_46665_12
Type: TF
Location: 15750 - 16874 (+)
Gene ID: k141_46665_13
Type: TC
Location: 16921 - 18294 (-)
Gene ID: k141_46665_14
Type: CAZyme
Location: 18516 - 20597 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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