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Cluster: SW178_7_CGC47

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_39583 k141_39583_3 1977 3458 + 3.A.1.121.5
TF k141_39583 k141_39583_4 3487 4536 - HTH_AraC
CAZyme k141_39583 k141_39583_5 4764 7049 + CBM67 | GH78
TC k141_39583 k141_39583_6 7112 8506 + 2.A.2.3.3
CAZyme k141_39583 k141_39583_7 8506 9834 + GH30_1
NULL(UNKNOWN) k141_39583 k141_39583_8 10095 11045 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_39583 k141_39583_9 11073 14132 + GH3
NULL(UNKNOWN) k141_39583 k141_39583_10 14125 14583 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_39583 k141_39583_11 14592 15830 + GH5_44
Gene ID: k141_39583_3
Type: TC
Location: 1977 - 3458 (+)
Gene ID: k141_39583_4
Type: TF
Location: 3487 - 4536 (-)
Gene ID: k141_39583_5
Type: CAZyme
Location: 4764 - 7049 (+)
Gene ID: k141_39583_6
Type: TC
Location: 7112 - 8506 (+)
Gene ID: k141_39583_7
Type: CAZyme
Location: 8506 - 9834 (+)
Gene ID: k141_39583_8
Type:
Location: 10095 - 11045 (+)
Gene ID: k141_39583_9
Type: CAZyme
Location: 11073 - 14132 (+)
Gene ID: k141_39583_10
Type:
Location: 14125 - 14583 (+)
Gene ID: k141_39583_11
Type: CAZyme
Location: 14592 - 15830 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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