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Cluster: SW178_7_CGC42

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_20218 k141_20218_41 47605 49794 - CBM67 | GH78
CAZyme k141_20218 k141_20218_42 49823 50944 - GH88
CAZyme k141_20218 k141_20218_43 50949 52679 - GH154
CAZyme k141_20218 k141_20218_44 52672 54480 - GH2
TC k141_20218 k141_20218_45 54499 55107 - 9.B.28.1.2
TC k141_20218 k141_20218_46 55157 56005 - 3.A.1.1.11
TC k141_20218 k141_20218_47 56024 56941 - 3.A.1.1.7
TC k141_20218 k141_20218_48 57026 58372 - 3.A.1.1.7
TC k141_20218 k141_20218_49 58674 60515 + 8.A.59.2.1
Gene ID: k141_20218_41
Type: CAZyme
Location: 47605 - 49794 (-)
Gene ID: k141_20218_42
Type: CAZyme
Location: 49823 - 50944 (-)
Gene ID: k141_20218_43
Type: CAZyme
Location: 50949 - 52679 (-)
Gene ID: k141_20218_44
Type: CAZyme
Location: 52672 - 54480 (-)
Gene ID: k141_20218_45
Type: TC
Location: 54499 - 55107 (-)
Gene ID: k141_20218_46
Type: TC
Location: 55157 - 56005 (-)
Gene ID: k141_20218_47
Type: TC
Location: 56024 - 56941 (-)
Gene ID: k141_20218_48
Type: TC
Location: 57026 - 58372 (-)
Gene ID: k141_20218_49
Type: TC
Location: 58674 - 60515 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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