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Cluster: SW178_7_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_50689 k141_50689_182 206820 207569 - 3.A.1.7.1
TC k141_50689 k141_50689_183 207600 208460 - 3.A.1.7.5
TC k141_50689 k141_50689_184 208453 209346 - 3.A.1.7.5
STP k141_50689 k141_50689_185 209350 210285 - LysR_substrate
CAZyme k141_50689 k141_50689_186 210610 212958 + GH3
TC k141_50689 k141_50689_187 213019 214653 - 2.A.58.2.2
pfam k141_50689 k141_50689_188 215245 215601 - SpoVAC_SpoVAEB
pfam k141_50689 k141_50689_189 215676 216695 - SpoVAD
TC k141_50689 k141_50689_190 216874 217344 + 9.A.11.1.1
Gene ID: k141_50689_182
Type: TC
Location: 206820 - 207569 (-)
Gene ID: k141_50689_183
Type: TC
Location: 207600 - 208460 (-)
Gene ID: k141_50689_184
Type: TC
Location: 208453 - 209346 (-)
Gene ID: k141_50689_185
Type: STP
Location: 209350 - 210285 (-)
Gene ID: k141_50689_186
Type: CAZyme
Location: 210610 - 212958 (+)
Gene ID: k141_50689_187
Type: TC
Location: 213019 - 214653 (-)
Gene ID: k141_50689_188
Type: pfam
Location: 215245 - 215601 (-)
Gene ID: k141_50689_189
Type: pfam
Location: 215676 - 216695 (-)
Gene ID: k141_50689_190
Type: TC
Location: 216874 - 217344 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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