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Cluster: SW178_7_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_41653 k141_41653_18 19772 22000 - GH3
CAZyme k141_41653 k141_41653_19 22018 23577 - GH43_35
peptidase k141_41653 k141_41653_20 23628 24614 - S09.UPW
CAZyme k141_41653 k141_41653_21 24653 26236 - CE20 | CE20
CAZyme k141_41653 k141_41653_22 26274 27548 - GH1
TC k141_41653 k141_41653_23 27545 28933 - 2.A.2.3.3
CAZyme k141_41653 k141_41653_24 29132 31642 - GH2
CAZyme k141_41653 k141_41653_25 31693 34440 - GH106
CAZyme k141_41653 k141_41653_26 34453 36069 - GH35
CAZyme k141_41653 k141_41653_27 36072 38363 - GH2
TF k141_41653 k141_41653_28 38544 39770 - HTH_AraC | HTH_AraC
pfam k141_41653 k141_41653_29 39856 41343 - MFS_2
CAZyme k141_41653 k141_41653_30 41494 44283 - CBM67 | GH78
Gene ID: k141_41653_18
Type: CAZyme
Location: 19772 - 22000 (-)
Gene ID: k141_41653_19
Type: CAZyme
Location: 22018 - 23577 (-)
Gene ID: k141_41653_20
Type: peptidase
Location: 23628 - 24614 (-)
Gene ID: k141_41653_21
Type: CAZyme
Location: 24653 - 26236 (-)
Gene ID: k141_41653_22
Type: CAZyme
Location: 26274 - 27548 (-)
Gene ID: k141_41653_23
Type: TC
Location: 27545 - 28933 (-)
Gene ID: k141_41653_24
Type: CAZyme
Location: 29132 - 31642 (-)
Gene ID: k141_41653_25
Type: CAZyme
Location: 31693 - 34440 (-)
Gene ID: k141_41653_26
Type: CAZyme
Location: 34453 - 36069 (-)
Gene ID: k141_41653_27
Type: CAZyme
Location: 36072 - 38363 (-)
Gene ID: k141_41653_28
Type: TF
Location: 38544 - 39770 (-)
Gene ID: k141_41653_29
Type: pfam
Location: 39856 - 41343 (-)
Gene ID: k141_41653_30
Type: CAZyme
Location: 41494 - 44283 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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