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Cluster: SW178_7_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_29051 k141_29051_33 36984 38855 + 3.A.3.6.10
TF k141_29051 k141_29051_34 38871 39233 + HTH_5
TC k141_29051 k141_29051_35 39304 40506 - 2.A.86.1.9
pfam k141_29051 k141_29051_36 40601 40945 + Trns_repr_metal
TC k141_29051 k141_29051_37 40992 43559 + 3.A.3.5.15
STP k141_29051 k141_29051_38 43628 44149 + Nitroreductase | Nitroreductase
pfam k141_29051 k141_29051_39 44377 45102 + Hydrolase | Hydrolase_like | HAD_2
CAZyme k141_29051 k141_29051_40 45135 47477 + GH31_1
TF k141_29051 k141_29051_41 47646 48020 + GntR
TC k141_29051 k141_29051_42 48022 48876 + 3.A.1.105.7
Gene ID: k141_29051_33
Type: TC
Location: 36984 - 38855 (+)
Gene ID: k141_29051_34
Type: TF
Location: 38871 - 39233 (+)
Gene ID: k141_29051_35
Type: TC
Location: 39304 - 40506 (-)
Gene ID: k141_29051_36
Type: pfam
Location: 40601 - 40945 (+)
Gene ID: k141_29051_37
Type: TC
Location: 40992 - 43559 (+)
Gene ID: k141_29051_38
Type: STP
Location: 43628 - 44149 (+)
Gene ID: k141_29051_39
Type: pfam
Location: 44377 - 45102 (+)
Gene ID: k141_29051_40
Type: CAZyme
Location: 45135 - 47477 (+)
Gene ID: k141_29051_41
Type: TF
Location: 47646 - 48020 (+)
Gene ID: k141_29051_42
Type: TC
Location: 48022 - 48876 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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