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Cluster: SW178_7_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_61935 k141_61935_5 3370 4062 - 9.B.28.1.2
TF k141_61935 k141_61935_6 4115 5185 - LacI
TC k141_61935 k141_61935_7 5521 6471 + 3.A.1.1.10
TC k141_61935 k141_61935_8 6484 7383 + 3.A.1.1.29
STP k141_61935 k141_61935_9 7428 9125 + SBP_bac_1
CAZyme k141_61935 k141_61935_10 9159 10718 + GH32
Gene ID: k141_61935_5
Type: TC
Location: 3370 - 4062 (-)
Gene ID: k141_61935_6
Type: TF
Location: 4115 - 5185 (-)
Gene ID: k141_61935_7
Type: TC
Location: 5521 - 6471 (+)
Gene ID: k141_61935_8
Type: TC
Location: 6484 - 7383 (+)
Gene ID: k141_61935_9
Type: STP
Location: 7428 - 9125 (+)
Gene ID: k141_61935_10
Type: CAZyme
Location: 9159 - 10718 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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