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Cluster: SW178_0_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_9067 k141_9067_40 37573 38397 - 3.A.1.24.5
TC k141_9067 k141_9067_41 38884 39930 + 3.A.1.20.1
TC k141_9067 k141_9067_42 40017 41126 + 3.A.1.20.1
TC k141_9067 k141_9067_43 41113 42777 + 3.A.1.20.1
TC k141_9067 k141_9067_44 42801 44519 + 8.A.59.2.1
TF k141_9067 k141_9067_45 44506 45279 + HTH_AraC
TC k141_9067 k141_9067_46 45513 46673 + 2.A.1.60.3
CAZyme k141_9067 k141_9067_47 46770 48170 - AA4
pfam k141_9067 k141_9067_48 48309 49079 + adh_short | adh_short_C2
pfam k141_9067 k141_9067_49 49502 50500 + URO-D
TC k141_9067 k141_9067_50 50541 51404 + 3.A.1.3.14
TC k141_9067 k141_9067_51 51424 52218 + 3.A.1.3.13
TC k141_9067 k141_9067_52 52235 52942 + 3.A.1.3.13
TC k141_9067 k141_9067_53 52960 53709 + 3.A.1.3.13
Gene ID: k141_9067_40
Type: TC
Location: 37573 - 38397 (-)
Gene ID: k141_9067_41
Type: TC
Location: 38884 - 39930 (+)
Gene ID: k141_9067_42
Type: TC
Location: 40017 - 41126 (+)
Gene ID: k141_9067_43
Type: TC
Location: 41113 - 42777 (+)
Gene ID: k141_9067_44
Type: TC
Location: 42801 - 44519 (+)
Gene ID: k141_9067_45
Type: TF
Location: 44506 - 45279 (+)
Gene ID: k141_9067_46
Type: TC
Location: 45513 - 46673 (+)
Gene ID: k141_9067_47
Type: CAZyme
Location: 46770 - 48170 (-)
Gene ID: k141_9067_48
Type: pfam
Location: 48309 - 49079 (+)
Gene ID: k141_9067_49
Type: pfam
Location: 49502 - 50500 (+)
Gene ID: k141_9067_50
Type: TC
Location: 50541 - 51404 (+)
Gene ID: k141_9067_51
Type: TC
Location: 51424 - 52218 (+)
Gene ID: k141_9067_52
Type: TC
Location: 52235 - 52942 (+)
Gene ID: k141_9067_53
Type: TC
Location: 52960 - 53709 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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