Cluster: SW178_0_CGC15
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: SW178_0
- CGC Family ID: CGCFAM_00314
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_5918 | k141_5918_5 | 5295 | 7703 | - | GT4 |
| TC | k141_5918 | k141_5918_6 | 7713 | 8444 | - | 3.A.1.103.1 |
| TC | k141_5918 | k141_5918_7 | 8455 | 9237 | - | 3.A.1.103.6 |
| CAZyme | k141_5918 | k141_5918_8 | 9302 | 11161 | - | GT4 |
| pfam | k141_5918 | k141_5918_9 | 11187 | 12041 | - | LicD |
| CAZyme | k141_5918 | k141_5918_10 | 12056 | 12823 | - | GT111 |
| TC | k141_5918 | k141_5918_11 | 13209 | 14660 | - | 9.B.18.1.2 |
Gene ID: k141_5918_5
Type: CAZyme
Location: 5295 - 7703 (-)
Type: CAZyme
Location: 5295 - 7703 (-)
Gene ID: k141_5918_6
Type: TC
Location: 7713 - 8444 (-)
Type: TC
Location: 7713 - 8444 (-)
Gene ID: k141_5918_7
Type: TC
Location: 8455 - 9237 (-)
Type: TC
Location: 8455 - 9237 (-)
Gene ID: k141_5918_8
Type: CAZyme
Location: 9302 - 11161 (-)
Type: CAZyme
Location: 9302 - 11161 (-)
Gene ID: k141_5918_9
Type: pfam
Location: 11187 - 12041 (-)
Type: pfam
Location: 11187 - 12041 (-)
Gene ID: k141_5918_10
Type: CAZyme
Location: 12056 - 12823 (-)
Type: CAZyme
Location: 12056 - 12823 (-)
Gene ID: k141_5918_11
Type: TC
Location: 13209 - 14660 (-)
Type: TC
Location: 13209 - 14660 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Caecibacter
Species
Caecibacter massiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.