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Cluster: SW177_bin.32_sub_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_75085 k141_75085_1 1 1677 - 4.A.3.1.1
TF k141_75085 k141_75085_2 1963 2964 + LacI
TC k141_75085 k141_75085_3 3297 5057 - 4.A.3.1.1
CAZyme k141_75085 k141_75085_4 5234 6676 - GH1
TF k141_75085 k141_75085_5 7018 8055 + LacI
CAZyme k141_75085 k141_75085_6 8332 9771 - GH1
TC k141_75085 k141_75085_7 9968 11743 - 4.A.3.1.1
TF k141_75085 k141_75085_8 12101 13105 + LacI
TC k141_75085 k141_75085_9 13320 13658 + 4.A.3.1.2
Gene ID: k141_75085_1
Type: TC
Location: 1 - 1677 (-)
Gene ID: k141_75085_2
Type: TF
Location: 1963 - 2964 (+)
Gene ID: k141_75085_3
Type: TC
Location: 3297 - 5057 (-)
Gene ID: k141_75085_4
Type: CAZyme
Location: 5234 - 6676 (-)
Gene ID: k141_75085_5
Type: TF
Location: 7018 - 8055 (+)
Gene ID: k141_75085_6
Type: CAZyme
Location: 8332 - 9771 (-)
Gene ID: k141_75085_7
Type: TC
Location: 9968 - 11743 (-)
Gene ID: k141_75085_8
Type: TF
Location: 12101 - 13105 (+)
Gene ID: k141_75085_9
Type: TC
Location: 13320 - 13658 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_75085_5 vegetarian > omnivore 1.04352 0.01332

🧭 Explore Read Mapping of CGC

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