Cluster: SW171_30_CGC6
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: SW171_30
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_29989 | k141_29989_108 | 116882 | 117964 | - | GT2 |
| pfam | k141_29989 | k141_29989_109 | 118041 | 119018 | + | Stealth_CR2 |
| TC | k141_29989 | k141_29989_110 | 119022 | 119819 | - | 2.A.5.5.2 |
| CAZyme | k141_29989 | k141_29989_111 | 119829 | 120938 | - | GT28 |
| pfam | k141_29989 | k141_29989_112 | 120926 | 121588 | - | G3P_acyltransf |
| TC | k141_29989 | k141_29989_113 | 121766 | 123481 | - | 2.A.114.1.3 |
| CAZyme | k141_29989 | k141_29989_114 | 123994 | 128370 | - | CBM77 | PL1 | PL9_1 |
Gene ID: k141_29989_108
Type: CAZyme
Location: 116882 - 117964 (-)
Type: CAZyme
Location: 116882 - 117964 (-)
Gene ID: k141_29989_109
Type: pfam
Location: 118041 - 119018 (+)
Type: pfam
Location: 118041 - 119018 (+)
Gene ID: k141_29989_110
Type: TC
Location: 119022 - 119819 (-)
Type: TC
Location: 119022 - 119819 (-)
Gene ID: k141_29989_111
Type: CAZyme
Location: 119829 - 120938 (-)
Type: CAZyme
Location: 119829 - 120938 (-)
Gene ID: k141_29989_112
Type: pfam
Location: 120926 - 121588 (-)
Type: pfam
Location: 120926 - 121588 (-)
Gene ID: k141_29989_113
Type: TC
Location: 121766 - 123481 (-)
Type: TC
Location: 121766 - 123481 (-)
Gene ID: k141_29989_114
Type: CAZyme
Location: 123994 - 128370 (-)
Type: CAZyme
Location: 123994 - 128370 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_29989_108 | vegetarian > omnivore | 2.04408 | 0.01456 |
| k141_29989_108 | vegan > omnivore | 2.46218 | 0.00770 |
| k141_29989_109 | vegan > omnivore | 1.30676 | 0.00770 |
| k141_29989_109 | vegetarian > omnivore | 1.33661 | 0.01456 |
| k141_29989_110 | vegan > omnivore | 1.26914 | 0.00770 |
| k141_29989_110 | vegetarian > omnivore | 1.54135 | 0.01456 |
| k141_29989_111 | vegetarian > omnivore | 1.78346 | 0.01456 |
| k141_29989_111 | vegan > omnivore | 1.82001 | 0.00770 |
| k141_29989_112 | vegetarian > omnivore | 1.85257 | 0.01456 |
| k141_29989_112 | vegan > omnivore | 1.49218 | 0.00770 |
| k141_29989_114 | vegetarian > omnivore | 1.46264 | 0.01456 |