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Cluster: SW171_30_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_29989 k141_29989_60 63965 66118 - PL1
pfam k141_29989 k141_29989_61 66386 66880 - UDG
pfam k141_29989 k141_29989_62 66955 67545 - DNA_binding_1 | Methyltransf_1N
TC k141_29989 k141_29989_63 67809 70358 - 3.A.3.5.15
pfam k141_29989 k141_29989_64 70373 70750 - Trns_repr_metal
TF k141_29989 k141_29989_65 70932 71303 + Fe_dep_repress
CAZyme k141_29989 k141_29989_66 71326 72456 - CE12
pfam k141_29989 k141_29989_67 72530 72928 - Acetyltransf_1 | Acetyltransf_7 | Acetyltransf_10
TC k141_29989 k141_29989_68 72947 74647 - 1.B.52.2.2
Gene ID: k141_29989_60
Type: CAZyme
Location: 63965 - 66118 (-)
Gene ID: k141_29989_61
Type: pfam
Location: 66386 - 66880 (-)
Gene ID: k141_29989_62
Type: pfam
Location: 66955 - 67545 (-)
Gene ID: k141_29989_63
Type: TC
Location: 67809 - 70358 (-)
Gene ID: k141_29989_64
Type: pfam
Location: 70373 - 70750 (-)
Gene ID: k141_29989_65
Type: TF
Location: 70932 - 71303 (+)
Gene ID: k141_29989_66
Type: CAZyme
Location: 71326 - 72456 (-)
Gene ID: k141_29989_67
Type: pfam
Location: 72530 - 72928 (-)
Gene ID: k141_29989_68
Type: TC
Location: 72947 - 74647 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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