Cluster: SW171_30_CGC29
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: SW171_30
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_110735 | k141_110735_3 | 1091 | 2062 | - | GH23 |
| STP | k141_110735 | k141_110735_4 | 2053 | 2490 | - | NUDIX |
| pfam | k141_110735 | k141_110735_5 | 2610 | 4094 | - | Transpeptidase | PBP_dimer_2 |
| TC | k141_110735 | k141_110735_6 | 4042 | 5403 | - | 2.A.103.1.7 |
Gene ID: k141_110735_3
Type: CAZyme
Location: 1091 - 2062 (-)
Type: CAZyme
Location: 1091 - 2062 (-)
Gene ID: k141_110735_4
Type: STP
Location: 2053 - 2490 (-)
Type: STP
Location: 2053 - 2490 (-)
Gene ID: k141_110735_5
Type: pfam
Location: 2610 - 4094 (-)
Type: pfam
Location: 2610 - 4094 (-)
Gene ID: k141_110735_6
Type: TC
Location: 4042 - 5403 (-)
Type: TC
Location: 4042 - 5403 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_110735_3 | vegan > omnivore | 2.48277 | 0.00770 |
| k141_110735_3 | vegetarian > omnivore | 1.21400 | 0.01456 |
| k141_110735_5 | vegan > omnivore | 1.06826 | 0.00770 |
| k141_110735_6 | vegan > omnivore | 1.07095 | 0.00770 |