Cluster: SW171_30_CGC28
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: SW171_30
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_86012 | k141_86012_59 | 67253 | 69166 | - | CBM48 | GH13_9 |
| pfam | k141_86012 | k141_86012_60 | 69394 | 70356 | + | Glycos_transf_4 |
| pfam | k141_86012 | k141_86012_61 | 70465 | 71421 | + | RNase_T |
| TC | k141_86012 | k141_86012_62 | 71504 | 72469 | - | 2.A.19.5.2 |
| TC | k141_86012 | k141_86012_63 | 72928 | 74613 | + | 1.B.52.2.1 |
Gene ID: k141_86012_59
Type: CAZyme
Location: 67253 - 69166 (-)
Type: CAZyme
Location: 67253 - 69166 (-)
Gene ID: k141_86012_60
Type: pfam
Location: 69394 - 70356 (+)
Type: pfam
Location: 69394 - 70356 (+)
Gene ID: k141_86012_61
Type: pfam
Location: 70465 - 71421 (+)
Type: pfam
Location: 70465 - 71421 (+)
Gene ID: k141_86012_62
Type: TC
Location: 71504 - 72469 (-)
Type: TC
Location: 71504 - 72469 (-)
Gene ID: k141_86012_63
Type: TC
Location: 72928 - 74613 (+)
Type: TC
Location: 72928 - 74613 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_86012_61 | vegan > omnivore | 2.00357 | 0.00770 |
| k141_86012_61 | vegetarian > omnivore | 1.46306 | 0.01456 |