Cluster: SW171_30_CGC26
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: SW171_30
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_10969 | k141_10969_121 | 139903 | 142470 | + | 3.A.5.1.3 |
| pfam | k141_10969 | k141_10969_122 | 142409 | 143608 | + | RF-1 | PCRF |
| STP | k141_10969 | k141_10969_123 | 143650 | 144111 | + | CheW |
| CAZyme | k141_10969 | k141_10969_124 | 144141 | 145676 | + | GH77 |
Gene ID: k141_10969_121
Type: TC
Location: 139903 - 142470 (+)
Type: TC
Location: 139903 - 142470 (+)
Gene ID: k141_10969_122
Type: pfam
Location: 142409 - 143608 (+)
Type: pfam
Location: 142409 - 143608 (+)
Gene ID: k141_10969_123
Type: STP
Location: 143650 - 144111 (+)
Type: STP
Location: 143650 - 144111 (+)
Gene ID: k141_10969_124
Type: CAZyme
Location: 144141 - 145676 (+)
Type: CAZyme
Location: 144141 - 145676 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_10969_123 | vegan > omnivore | 2.29517 | 0.00770 |
| k141_10969_123 | vegetarian > omnivore | 1.61297 | 0.01456 |