dbCAN Logo

Cluster: SW171_30_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_81356 k141_81356_26 30423 31121 - 3.A.1.134.3
TC k141_81356 k141_81356_27 31304 33376 - 3.A.3.32.3
pfam k141_81356 k141_81356_28 33429 33761 - DUF6110
CAZyme k141_81356 k141_81356_29 34020 34859 + CE4
TC k141_81356 k141_81356_30 34856 36016 - 2.A.1.15.18
pfam k141_81356 k141_81356_31 36191 37414 - Glyco_trans_1_2
TC k141_81356 k141_81356_32 37416 38240 - 3.A.1.132.3
Gene ID: k141_81356_26
Type: TC
Location: 30423 - 31121 (-)
Gene ID: k141_81356_27
Type: TC
Location: 31304 - 33376 (-)
Gene ID: k141_81356_28
Type: pfam
Location: 33429 - 33761 (-)
Gene ID: k141_81356_29
Type: CAZyme
Location: 34020 - 34859 (+)
Gene ID: k141_81356_30
Type: TC
Location: 34856 - 36016 (-)
Gene ID: k141_81356_31
Type: pfam
Location: 36191 - 37414 (-)
Gene ID: k141_81356_32
Type: TC
Location: 37416 - 38240 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_81356_26 vegan > omnivore 2.73954 0.00770
k141_81356_26 vegetarian > omnivore 1.12109 0.01456
k141_81356_28 vegan > omnivore 1.62072 0.00770
k141_81356_30 vegetarian > vegan 1.92316 0.01529
k141_81356_32 vegan > omnivore 1.09363 0.00770

🧭 Explore Read Mapping of CGC

← Back to Cluster List