Cluster: SW171_30_CGC18
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: SW171_30
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_52637 | k141_52637_60 | 63093 | 65000 | - | 2.A.67.4.2 |
| CAZyme | k141_52637 | k141_52637_61 | 65195 | 68923 | - | GH13_14 |
| NULL(UNKNOWN) | k141_52637 | k141_52637_62 | 69355 | 69666 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | k141_52637 | k141_52637_63 | 70090 | 71781 | - | EAL | GGDEF |
| TC | k141_52637 | k141_52637_64 | 71828 | 73546 | - | 1.B.52.2.2 |
Gene ID: k141_52637_60
Type: TC
Location: 63093 - 65000 (-)
Type: TC
Location: 63093 - 65000 (-)
Gene ID: k141_52637_61
Type: CAZyme
Location: 65195 - 68923 (-)
Type: CAZyme
Location: 65195 - 68923 (-)
Gene ID: k141_52637_62
Type:
Location: 69355 - 69666 (+)
Type:
Location: 69355 - 69666 (+)
Gene ID: k141_52637_63
Type: STP
Location: 70090 - 71781 (-)
Type: STP
Location: 70090 - 71781 (-)
Gene ID: k141_52637_64
Type: TC
Location: 71828 - 73546 (-)
Type: TC
Location: 71828 - 73546 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_52637_62 | vegan > omnivore | 3.27345 | 0.00770 |
| k141_52637_62 | vegetarian > omnivore | 1.68982 | 0.01456 |