Cluster: SW171_30_CGC17
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: SW171_30
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_85403 | k141_85403_27 | 33079 | 34407 | + | GH13_20 |
| TC | k141_85403 | k141_85403_28 | 34413 | 35342 | + | 2.A.69.4.3 |
| TC | k141_85403 | k141_85403_29 | 35332 | 36021 | - | 1.C.113.1.2 |
| CAZyme | k141_85403 | k141_85403_30 | 36431 | 40069 | + | GH28 |
Gene ID: k141_85403_27
Type: CAZyme
Location: 33079 - 34407 (+)
Type: CAZyme
Location: 33079 - 34407 (+)
Gene ID: k141_85403_28
Type: TC
Location: 34413 - 35342 (+)
Type: TC
Location: 34413 - 35342 (+)
Gene ID: k141_85403_29
Type: TC
Location: 35332 - 36021 (-)
Type: TC
Location: 35332 - 36021 (-)
Gene ID: k141_85403_30
Type: CAZyme
Location: 36431 - 40069 (+)
Type: CAZyme
Location: 36431 - 40069 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_85403_27 | vegan > omnivore | 1.74225 | 0.00770 |
| k141_85403_28 | vegan > omnivore | 1.87518 | 0.00770 |
| k141_85403_29 | vegan > omnivore | 1.33485 | 0.00770 |