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Cluster: SW171_30_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_2077 k141_2077_200 239525 241270 + 9.B.34.1.4
TC k141_2077 k141_2077_201 241263 242192 + 3.A.11.1.2
TC k141_2077 k141_2077_202 242225 243235 + 3.A.1.23.4
pfam k141_2077 k141_2077_203 243228 243998 + CbiQ
TC k141_2077 k141_2077_204 244047 244832 + 3.A.1.23.2
pfam k141_2077 k141_2077_205 244875 245474 + YfbR-like | HD_3
TC k141_2077 k141_2077_206 245510 246883 + 2.A.66.1.33
sulfatase k141_2077 k141_2077_207 246899 249508 - S1_97
TC k141_2077 k141_2077_208 249521 251296 - 9.B.34.1.3
CAZyme k141_2077 k141_2077_209 251430 252881 + GH43_35
TF k141_2077 k141_2077_210 253055 253738 + HTH_3
TC k141_2077 k141_2077_211 253948 255582 + 4.C.1.1.4
STP k141_2077 k141_2077_212 255623 257350 + Fer4
pfam k141_2077 k141_2077_213 257362 257937 + POR
TC k141_2077 k141_2077_214 258077 259321 - 2.A.21.2.2
Gene ID: k141_2077_200
Type: TC
Location: 239525 - 241270 (+)
Gene ID: k141_2077_201
Type: TC
Location: 241263 - 242192 (+)
Gene ID: k141_2077_202
Type: TC
Location: 242225 - 243235 (+)
Gene ID: k141_2077_203
Type: pfam
Location: 243228 - 243998 (+)
Gene ID: k141_2077_204
Type: TC
Location: 244047 - 244832 (+)
Gene ID: k141_2077_205
Type: pfam
Location: 244875 - 245474 (+)
Gene ID: k141_2077_206
Type: TC
Location: 245510 - 246883 (+)
Gene ID: k141_2077_207
Type: sulfatase
Location: 246899 - 249508 (-)
Gene ID: k141_2077_208
Type: TC
Location: 249521 - 251296 (-)
Gene ID: k141_2077_209
Type: CAZyme
Location: 251430 - 252881 (+)
Gene ID: k141_2077_210
Type: TF
Location: 253055 - 253738 (+)
Gene ID: k141_2077_211
Type: TC
Location: 253948 - 255582 (+)
Gene ID: k141_2077_212
Type: STP
Location: 255623 - 257350 (+)
Gene ID: k141_2077_213
Type: pfam
Location: 257362 - 257937 (+)
Gene ID: k141_2077_214
Type: TC
Location: 258077 - 259321 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_2077_200 vegan > omnivore 1.70613 0.00770
k141_2077_201 vegan > omnivore 2.53062 0.00770
k141_2077_201 vegetarian > omnivore 2.28181 0.01456
k141_2077_202 vegetarian > omnivore 1.05089 0.01456
k141_2077_202 vegan > omnivore 1.59700 0.00770
k141_2077_205 vegan > omnivore 1.23919 0.00770
k141_2077_206 vegan > omnivore 1.94528 0.00770

🧭 Explore Read Mapping of CGC

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