Cluster: SW171_30_CGC15
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 3
- Substrate:
- Genome ID: SW171_30
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_2077 | k141_2077_189 | 227870 | 229297 | + | GT4 |
| pfam | k141_2077 | k141_2077_190 | 229327 | 230787 | + | PelG |
| pfam | k141_2077 | k141_2077_191 | 230787 | 231167 | + | DUF2304 |
| CAZyme | k141_2077 | k141_2077_192 | 231164 | 232369 | + | GT4 |
| CAZyme | k141_2077 | k141_2077_193 | 232375 | 233139 | + | GT2 |
| pfam | k141_2077 | k141_2077_194 | 233129 | 234256 | + | DUF4832 | DUF4874 |
| pfam | k141_2077 | k141_2077_195 | 234232 | 235749 | - | DUF4832 | DUF4874 |
| TC | k141_2077 | k141_2077_196 | 235838 | 237406 | + | 2.A.66.1.40 |
Gene ID: k141_2077_189
Type: CAZyme
Location: 227870 - 229297 (+)
Type: CAZyme
Location: 227870 - 229297 (+)
Gene ID: k141_2077_190
Type: pfam
Location: 229327 - 230787 (+)
Type: pfam
Location: 229327 - 230787 (+)
Gene ID: k141_2077_191
Type: pfam
Location: 230787 - 231167 (+)
Type: pfam
Location: 230787 - 231167 (+)
Gene ID: k141_2077_192
Type: CAZyme
Location: 231164 - 232369 (+)
Type: CAZyme
Location: 231164 - 232369 (+)
Gene ID: k141_2077_193
Type: CAZyme
Location: 232375 - 233139 (+)
Type: CAZyme
Location: 232375 - 233139 (+)
Gene ID: k141_2077_194
Type: pfam
Location: 233129 - 234256 (+)
Type: pfam
Location: 233129 - 234256 (+)
Gene ID: k141_2077_195
Type: pfam
Location: 234232 - 235749 (-)
Type: pfam
Location: 234232 - 235749 (-)
Gene ID: k141_2077_196
Type: TC
Location: 235838 - 237406 (+)
Type: TC
Location: 235838 - 237406 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_2077_189 | vegan > omnivore | 1.94144 | 0.00770 |
| k141_2077_190 | vegan > omnivore | 2.20672 | 0.00770 |
| k141_2077_190 | vegetarian > omnivore | 1.03642 | 0.01456 |
| k141_2077_191 | vegan > omnivore | 2.24373 | 0.00770 |
| k141_2077_191 | vegetarian > omnivore | 2.28361 | 0.01456 |
| k141_2077_192 | vegan > omnivore | 1.59748 | 0.00770 |
| k141_2077_195 | vegan > omnivore | 1.75239 | 0.00770 |
| k141_2077_195 | vegetarian > omnivore | 1.02849 | 0.01456 |
| k141_2077_196 | vegetarian > omnivore | 1.17425 | 0.01456 |
| k141_2077_196 | vegan > omnivore | 1.46023 | 0.00770 |